Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015954287.1_cds_XP_016493201.1_83335
CDS Infomation

[gene=LOC107812568] [db_xref=GeneID:107812568] [protein=BRCA1-associated protein-like] [protein_id=XP_016493201.1] [location=complement(join(43674..43826,43925..43979,44276..44340,44454..44597,44834..44887,45042..45291,45413..45519,45865..45962,46682..46796,47244..47352,47466..47767))] [gbkey=CDS]
Sequence

ATGTTCACCCTCCAAATCCACACCGTCGACTTTCCACAGCCTCTTCCGACCACCGTCGCC
ACCACTTCCTCGGCCATACACAGCCCAAACCCTAACAATAACCTCAGCAGCCTAAGCTTA
TCAGAACTTAGAGGGATCGCCCATCTTTTCCGCCACCTTCCCTCTTCCACCACTATTTCT
AACCCAATTGCTCGCACCACCACCGTCTTTATTGTTGCTGTCCCAAATTACCTCTCCCCT
GATGATTTCCTCCTCTTTTGTGGGACCCATATTGCTGACTTCTCTCATGTCCTCTTCCTC
AAGAATGATGGAATAGAACATAGTTACAGTGTATTGATCAATCTTGTTAATCAATTGGCT
GCTGATGGGTTTTACTGTAGCTTCAATGGCAAAAGGTTTAGGCCTACTGAGGCTGAGGTT
TGCCATGTTTACTTTATTCAATCAGTGGAATACGCAGAGTCAGCACATATTGCAAGTACA
CCTCCTGTTGGTTATACTGAATTGCCAACGTGTCCAGTGTGCCTTGAAAGATTGGACCAA
GATACAAGTGGAATACAGAGTACATTATGTGATCATTCATTTCAGTGCTCTTGTGTCTCA
AAGTGGACCTATTTGGCATGCCAAGTCTGCCGACTTTGTCAGCAGCAAGATGAGAGACCT
ACCTGTTCAGAGTGTGGAACGTTGAAGAATCTTTGCGTTTGTCTGATTTGTGGTTTTGTA
GGGTGTGGAAGGTATGAGAAAAGGCATGCTATAAAACATTGGAGTGATGTAGCGCATCAC
TATTCACTTGAATTGGAAACCCAACAAATCTGGGACTATGTAGGCGACAAGTATGTCCAC
CGCTTGAATCAATCGAAAGGTGATGGAAAGTTGGTTACTGTGAATTCGCGTTGTACAGCA
GCTGATGGAGAATGTACAACTTGTGGCTATGATGAGGATTCAAGTTTTAGTGGTGCTCTT
TTCACCAGCAAAGTTGATTCGATTGTTGACGAGTACAACAATCTTCTTGCTAGTCAGCTG
GAGGCTCAAAGACAACATTATGAATCTCTACTAGCGGAGGCAAAAAGTGGAAAGGAGAGT
TCAATATCCAGGGTGGTGGAGAAGGCAGTTTTCTCTAAGATGAATGACATGCAAGCTAAG
ATAGAAATGTATACAGAGGAGACGAAGTCCGTTGAAGAGAGGAATCAAGTGCTTCTGAAA
AACCAACAGCTTTTGCAGACGAAGTGTAAAGAAACTGAAGAAAGAGAAAAGTTATCACTC
AAGTCGAAGGACGAGAAAATACTGGATCTCAAGGAACAGATACGCGACTTGAAAGTTTAT
GTTGAAGCTCAAAGAAAACTTTCAAACATGGGAATTTCAGATGGGAAAGGAGGGTCAGTT
CTCTCTGTAGAATCCAACCAATCTTCCAGCAATTCTCGAAGGCGATCAAAGCTAGGTCGA
AGAAGGAACTAG

Peptide Sequence

PEP ID

XP_016493201.1
PEP Infomation

PREDICTED: BRCA1-associated protein-like [Nicotiana tabacum]
Sequence

MFTLQIHTVDFPQPLPTTVATTSSAIHSPNPNNNLSSLSLSELRGIAHLFRHLPSSTTIS
NPIARTTTVFIVAVPNYLSPDDFLLFCGTHIADFSHVLFLKNDGIEHSYSVLINLVNQLA
ADGFYCSFNGKRFRPTEAEVCHVYFIQSVEYAESAHIASTPPVGYTELPTCPVCLERLDQ
DTSGIQSTLCDHSFQCSCVSKWTYLACQVCRLCQQQDERPTCSECGTLKNLCVCLICGFV
GCGRYEKRHAIKHWSDVAHHYSLELETQQIWDYVGDKYVHRLNQSKGDGKLVTVNSRCTA
ADGECTTCGYDEDSSFSGALFTSKVDSIVDEYNNLLASQLEAQRQHYESLLAEAKSGKES
SISRVVEKAVFSKMNDMQAKIEMYTEETKSVEERNQVLLKNQQLLQTKCKETEEREKLSL
KSKDEKILDLKEQIRDLKVYVEAQRKLSNMGISDGKGGSVLSVESNQSSSNSRRRSKLGR
RRN

Transcript Sequence

Gene sequence data has not been registered.